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Htftarget database

Web(C) According to the hTFtarget database, the first four TFs of both S100A12 and the 10 interacted genes were found. (D) GO and KEGG pathway analysis of both S100A12 and the 10 interacted genes. WebFeb 22, 2024 · Since FLI1 regulates the expression of its target genes by binding to their promoter regions, we explored whether it directly modulated the expression of TIE1, which has been reported to promote XPC-dependent nucleotide excision repair (NER) and chemotherapy resistance . hTFtarget ChIP-seq database also indicated that FLI1 might ...

hTFtarget: a comprehensive database for …

WebA study has developed a database named hTFtarget by creating a comprehensive TF-target relationship library for humans, which can serve as a useful resource for … WebNov 16, 2024 · In this study, we constructed a database named hTFtarget, which integrated huge human TF target resources (7,190 ChIP-Seq samples of 659 TFs and high … binary calculator with overflow https://pixelmotionuk.com

The role of LINC01419 in regulating the cell stemness in lung ...

WebNov 16, 2024 · In this study, we constructed a database named hTFtarget, which integrated huge human TF target resources (7,190 ChIP-Seq samples of 659 TFs and high … WebSep 12, 2024 · Finally, a transcription factor-key gene network was constructed based on ChEA3 platform and hTFtarget database, and a miRNA-key gene network was con-structed using starBase and the multimiR R package. Results: The most positively or negatively correlated modules of the two datasets were identified, and genes related to … binary call payoff

FLI1 regulates radiotherapy resistance in nasopharyngeal …

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Htftarget database

scAI: an unsupervised approach for the integrative analysis of …

WebAug 28, 2024 · The hTFtarget database was used to predict the upstream transcription factors of HAS2-AS1 and the JASPAR website was used to predict the binding sites of … WebFeb 3, 2024 · The binding TFs of the known marker genes and the chromosome loci of these motifs were found from hTFtarget database. d Visualization of cells by VscAI. Known marker genes (left panel) and motifs related with these marker genes (right panel) were projected onto the same low-dimensional space. The same motifs such as SMAD3 and …

Htftarget database

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http://bioinfo.life.hust.edu.cn/hTFtarget#!/ WebFeb 4, 2024 · Figure 3 S100A12-related partners and TFs.(A) A protein–protein interaction (PPI) network of S100A12 according to STRING database.(B) The correlation between …

WebJan 4, 2024 · TCGA, hTFtarget, and MSigDB databases were employed to identify NF- κ B-related metabolic genes (NFMGs). Based on NFMGs, we used consensus clustering … WebApr 20, 2024 · To explore the pathways through which FOXA1 acts on CC, the hTFtarget database was queried. Among all the downstream genes of FOXA1, we found that SIX4 had the largest log2FC value in the GSE63514 database, so we selected SIX4 as the downstream target of FOXA1 in this study (Figure 3(a)).

http://bioinfo.life.hust.edu.cn/hTFtarget#!/ http://gpb.big.ac.cn/articles/download/771

WebFeb 22, 2024 · Combined with the hTFtarget and Knock-TF databases, TFAP4 was found to potentially transcriptionally activate EGFR, KIAA0652, HSPA5, RAB7A, HIF1A, and LAMP1 . The RNAInter predicted that ELAVL1 had the highest number of potential hub genes . DGIdb showed that SORAFENIB could act on EGFR, HIF1A, and MAPK1 .

WebDATABASE hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets Qiong Zhang1,#, Wei Liu1,2,#, Hong-Mei … cypress college nursing program requirementsWebMay 11, 2024 · We compared the results which predicted by hTFtarget database with the DEGs identified by microarray analysis. As shown in Figure 3(A,B), there were 24 potential transcriptional regulators of NFATC1 that were altered. We next analyzed the correlation between the 24 transcription factors and NFATC1 (Figure S1). binary capital investment management ltWebOct 21, 2024 · Among all the TF databases, Animal Transcription Factor Database (AnimalTFDB) is the most comprehensive animal TF database including classification and annotation of genome-wide TFs and transcription cofactors (TcoFs). We constructed the AnimalTFDB in 2011 , and updated it in 2015 and 2024 with more species, annotations … binary calculation formula